LitSelect is the selection method associated our PALMER approach for gene-GO biclustering. PALMER was developed at the Medical University of South Carolina (MUSC). For any inquiries, please contact any members of the project, listed below.
The selection method used by LitSelect is as follows.
LitSelect uses the backend database GAIL as its data source. The database has an asociated webserver for interactively visualizing gene-gene associations derived from literature mining.
We also provide an R package 'palmer', associated with the novel biclustering algorithm. In addition to implementing the algorithm, the package also makes the literature mining data accessible through an API to facilitate usage of the algorithm.